Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSED-DAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF
2C95 Chain:A ((10-193))
NIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLIDGYPREVQQGEEFERR----IGQPTLLLYVDAGPETMTQRLLKRGET---------------------------SGRVDDNEETIKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDA-
General information:
TITO was launched using:
RESULT:
Template:
2C95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46658 for 1406 contacts (-33.2/contact) +
2D Compatibility (PS) -19976 + (NN) -10780 + (LL) 732
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -91032.0 ( -64.75 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2C95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C95-query.scw
PDB file :
Tito_Scwrl_2C95.pdb
: