Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAGQYYRPSAPELRKDREVALKNMQAFNNED--NSSKRNVILQKWFGATGKSIHMEQRFVCDYGCNIYVGENFYANFNQTFLDVCEIRIGDNCMFGPNCQLLTPLHPLDPIERNSGLEYGAPIQIGNNVWLGGGVTILPGVVLGDNVVVGAGSVVTKSFENNVVIAGNPAKIIKKLA
3SRT Chain:A ((4-186))
MTEKEKMLSGKGYYANDELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIE
General information:
TITO was launched using:
RESULT:
Template:
3SRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129010 for 1423 contacts (-90.7/contact) +
2D Compatibility (PS) -19880 + (NN) -7688 + (LL) 0
1D Compatibility (HY) -18400 + (ID) 5050
Total energy: -180028.0 ( -126.51 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3SRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SRT-query.scw
PDB file :
Tito_Scwrl_3SRT.pdb
: