Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED-----NYWYTAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGY-GEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSNGDFLNRDNIEHFVNYAAFCFEEFP-EVNYWTTFNEIGPIGDGQYLVGKFPPGIQYDL-AKVFQSHHNMMVSHARAVKLYKDKGY---KGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATY-LGYYSEMTMAGVK----------HILKENGGELDLREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGS-SKYQIKGVGRRVAPDYVPKTDWDWI-IYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSEAI-SDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET--QERYPKKSAHWYKQVAKTQIIE |
| 2E9L Chain:A ((1-466)) | --MAFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGI-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPE------FTEEE---KKMIKGTADFFAVQYYTTRLIKYQENKKG-------ELGILQDAEIEF-----F-PDPSWKNVDWIYVVPWGVCKLLKYIKDTYNN-PVIYITENGFPQSDP---APLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158265 for 3929 contacts (-40.3/contact) +
2D Compatibility (PS) -46231 + (NN) -15807 + (LL) 1260
1D Compatibility (HY) -26800 + (ID) 7450
Total energy: -253293.0 ( -64.47 by residue)
QMean score : 0.709
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