Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNLRNRSFLTLLDFSTAEVEFLLKLSEDLKRAKYAGIEQQKLVGKNIALIFEKDSTRTRCAFEVAAHDQGAHVTYLGPTGSQMGKKETSKDTARVLGGMYDGIEYRGFSQETVETLAEFSGVPVWNGLTDAD-HPTQVLADFLTAKECL-HKPYKDIRFTYVGDGRNNVANALMIGASIVGMTYHLVCPKELEPDPELLSKCQEIAKTTGASIEITADIAEGVRDSDVLYTDVWVSMGEPDEVWKERIALLEPYRITQEMLNMTENPNVIFEHCLPSFHNIDTKVGYDIYEKYGL--KEMEVSDEVFEGPHSVVFQEAENRMHTIKAVMVATLGD
2OTC Chain:A ((1-333))-SGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYARVPVWNGLTN-EFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFG-LHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK


General information:
TITO was launched using:
RESULT:

Template: 2OTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160426 for 2900 contacts (-55.3/contact) +
2D Compatibility (PS) -35833 + (NN) -22674 + (LL) 528
1D Compatibility (HY) -34400 + (ID) 9300
Total energy: -262105.0 ( -90.38 by residue)
QMean score : 0.612

(partial model without unconserved sides chains):
PDB file : Tito_2OTC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OTC-query.scw
PDB file : Tito_Scwrl_2OTC.pdb: