Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
4S35 Chain:A ((1-193))
---MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLTE---ELDERTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIALRRLKEKN-----RFEN--KEFLEKVRKGFLELAKEE-ENVVVIDASGEEEEVFKEILRALSGVL-----
General information:
TITO was launched using:
RESULT:
Template:
4S35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107109 for 1589 contacts (-67.4/contact) +
2D Compatibility (PS) -20896 + (NN) -8044 + (LL) 868
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -154181.0 ( -97.03 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_4S35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S35-query.scw
PDB file :
Tito_Scwrl_4S35.pdb
: