Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4NU0 Chain:A ((6-216))
MNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDEVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSLLERLSGRIIHRVTGETFHKVFNPPVDY-----KEEDYYQREDDKPETVKRRLDVNIAQGEPIIAHYRAKGLVHDIEGNQDINDVFSDIEKVLTNL--
General information:
TITO was launched using:
RESULT:
Template:
4NU0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77026 for 1610 contacts (-47.8/contact) +
2D Compatibility (PS) -23538 + (NN) -17610 + (LL) 204
1D Compatibility (HY) -22000 + (ID) 6050
Total energy: -146020.0 ( -90.70 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_4NU0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NU0-query.scw
PDB file :
Tito_Scwrl_4NU0.pdb
: