Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGVQDRVIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYGRVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAPIAATRMTQDILPPEVLEKLTPEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGNDGANFD--KPPSVQDVAARWAEITDLSGAKIAGFKL |
2ET6 Chain:A ((4-288)) | -VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDL-----------KAADVVVDEIVKNGG---VAVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYDD-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ET6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160697 for 2177 contacts (-73.8/contact) +
2D Compatibility (PS) -28584 + (NN) -12326 + (LL) 876
1D Compatibility (HY) -24400 + (ID) 6000
Total energy: -231131.0 ( -106.17 by residue)
QMean score : 0.485
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