Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPAQPR
3ONR Chain:A ((2-72))
VSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPSQPL
General information:
TITO was launched using:
RESULT:
Template:
3ONR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19620 for 406 contacts (-48.3/contact) +
2D Compatibility (PS) -8110 + (NN) -6519 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -46849.0 ( -115.39 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3ONR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ONR-query.scw
PDB file :
Tito_Scwrl_3ONR.pdb
: