Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKP-------------GLRQAVNHLRAEGFDVHSVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGP--LPLQDDNLGVDDIAQLTADAILANRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH |
3TSC Chain:A ((7-265)) | -GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAME-TNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTA----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TSC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168662 for 2111 contacts (-79.9/contact) +
2D Compatibility (PS) -26462 + (NN) -9995 + (LL) 2620
1D Compatibility (HY) -6400 + (ID) 3150
Total energy: -212049.0 ( -100.45 by residue)
QMean score : 0.582
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