Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIIEQVRAREILDSRGNPTVEVEVALIDGTFARAAVPSGASTGEHEAVELRDGGD-RYGGKGVQKAVQAVLDEIGPAVIGLNADDQRLVDQALVDLDGTPDKSRLGGNAILGVSLAVAKAAADSAELPLFRYVGGPNAHILPVPMMNILNGGAHADTAVDIQEFMVAPIGAPSFVEALRWGAEVYHALKSVLKKEGLSTGLGDEGGFAPDVAGTTAALDLISRAIESAGLRPGADVALALDAAATEFFTD-GTGYVFE--GTTRTADQMTEFYAGLLGAYPLVSIEDPLSEDDWDGWAALTASIGDRVQIVGDDIFVTNPERLEEGIERGVANALLVKVNQIGTLTETLDAVTLAHHGGYRTMISHRSGETEDTMIADLAVAIGSGQIKTGAPARSERVAKYNQLLRIEEALGDAARYAGDLAFPRFACETK |
| 3UJ2 Chain:A ((25-448)) | YLEIEKVIGREIIDSRGNPTVEAEVYLAGGVTGRGTAPSG---GEFEALELRDGDKGRFGGKGVTKAVQNINTEISEILSGMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLGGLNANRLPVPMMNILNGGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSKGLATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTIADLAVALNTGQIKTGAPSRSERVAKYNQLLRIEEELGDSAVYPGFTT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214227 for 3967 contacts (-54.0/contact) +
2D Compatibility (PS) -45800 + (NN) -28317 + (LL) 812
1D Compatibility (HY) -38400 + (ID) 11750
Total energy: -337682.0 ( -85.12 by residue)
QMean score : 0.538
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