Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------M-TGFGLRLAEA-KARRGPLCLGIDPHPELLRGWDLATTADGLAAFCDICVRAFADFAVVKP-QVAFFESYGAAGFAVLERTIAELRA-ADVLVLA-DA-KRGDIGATMSAYATAWVGDSPLAADAVTASPY-LGFG-SLRPLLEVAAAHGRGVFVLAATSNPEGAAVQNAAADGRSVAQLV-VDQVGA-ANEAAGPGPGS-IGVVVGATAPQA-PDLSAFTGP--VLVPGVGVQGG-RPEALGGLGGAASSQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
| 2AQW Chain:A ((2-322)) | HFKTKLKNRRSEVNTCLCIGLDPDEDDIKNFMKNEEQNGYKNIKNNMNSNNNGIENIIKIGKEILLTDGENIQNLS---EEDKFFYFFNHFCFYIINNTKEYALVYKMNFAFYIPYGSVGINALKNVFDYLNSMN---IPTMLDMKINDIGNTVKNYRKFIF--EYLKSDSCTINVYMGT-NMLKDICFDYEKNKYYSAYVLIKTTNKDSFIFQNELSINDKQAYIVMADETQKMATELKIEQNNEFIGFVVGSNAFEEMKIIRNKFPDSYILSPGIGAQNGDLYKTLKNGYNKDYEKLLINVGRAITKSPDPKKSSESYYNQIIQIFKD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100068 for 1925 contacts (-52.0/contact) +
2D Compatibility (PS) -27867 + (NN) -7959 + (LL) 916
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -149578.0 ( -77.70 by residue)
QMean score : 0.365
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