Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTI--ELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQ---TP-ELAEYF-GSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFG-GGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEPARLLSQFIHGIKTLPVTWS |
| 3IVY Chain:A ((38-426)) | -------------------------------------LPVAEFAELRSAAPIWWNGQDPGKGGGF-HDGGFWAITKLNDVKEISRHSDVFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAA---GSGDFVEQVSCELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAH--IDPKASSAELIGYAMKMAEEK-------IVTQLIQAD--GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWE-LYKKVRP--ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFGGT-GAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERLRSGWLNGIKHWQVDYT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210230 for 3103 contacts (-67.8/contact) +
2D Compatibility (PS) -39514 + (NN) -15964 + (LL) 2056
1D Compatibility (HY) -26400 + (ID) 7750
Total energy: -297802.0 ( -95.97 by residue)
QMean score : 0.477
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