Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDP-AAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1SJN Chain:A ((2-132))
-STTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAA-PIVVHRGDRIAQLLVQRVELVELVEVSSFDE----------------------
General information:
TITO was launched using:
RESULT:
Template:
1SJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86215 for 872 contacts (-98.9/contact) +
2D Compatibility (PS) -14217 + (NN) -6211 + (LL) -44
1D Compatibility (HY) -18800 + (ID) 6500
Total energy: -131987.0 ( -151.36 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1SJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SJN-query.scw
PDB file :
Tito_Scwrl_1SJN.pdb
: