Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTVGFDVAARLGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVKDAKADLHSGAQIMADT--GLAYYSGDDALNLPWLAMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAVAPLCNAMSRLGGVTLSKAGLRLQGID-VGDPRLPQVAATPEQIDALAADMRAASVLR
4PFM Chain:A ((1-293))---------HMINGSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQTVKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVAASTDIPQILYNVPGRTAVDMLPETIAQLVEVPNIIGV-DATGDVARVKQLRDLCGNDFLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIKGLFSALFCEANPIPVKWAAHKMGLISQGDIRLPLTELSTEFHGLLLDAMKNARIE-


General information:
TITO was launched using:
RESULT:

Template: 4PFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189935 for 2608 contacts (-72.8/contact) +
2D Compatibility (PS) -31500 + (NN) -17657 + (LL) 888
1D Compatibility (HY) -14000 + (ID) 4900
Total energy: -257104.0 ( -98.58 by residue)
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_4PFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PFM-query.scw
PDB file : Tito_Scwrl_4PFM.pdb: