Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKRASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKG-ALKNIVHGINHTDIGA-DDKIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHKGSRRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKATTREEINEYLRQMAMHSDLQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATIC-NDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
2D2I Chain:A ((1-338)) | ------------------------------------------------------------------------------------------------------------MTIRVAINGFGRIGRNFLRCWFGR--QNTDLEVVAINNTS----DARTAAHLLEYDSVLGRFNADISY--DENSITVNGKTMKIVCDRNPLNLPWKEWDID--LVIESTGVFVTAEGASKHIQA-GAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKAS-QTTMKGIIKYSD-LPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKSG----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2D2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -213968 for 2967 contacts (-72.1/contact) +
2D Compatibility (PS) -36986 + (NN) -18040 + (LL) 8284
1D Compatibility (HY) -24400 + (ID) 6450
Total energy: -291560.0 ( -98.27 by residue)
QMean score : 0.521
|
|
|