Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAES----GVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPAPGN------------GVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAGEISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGKVL-------KDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASN-LLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD |
3H7U Chain:A ((29-316)) | KLNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELAR-VPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFD-WSIPDYMFAKFAEIEQ-ARLVTGSFL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139264 for 2220 contacts (-62.7/contact) +
2D Compatibility (PS) -28514 + (NN) -9862 + (LL) 216
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -200424.0 ( -90.28 by residue)
QMean score : 0.473
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