Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNRGVVYL-GPGKVEVQNIPYPKMQDPQGRQIDHGVILRVVSTNICGSDQHMVRGRTT-APEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARA----------GGAYGYVDM-GGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYIAGAGPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQGFEIADLSKDT--PLHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQQEAPATVLNSLMGITRV-AGKIGIPGLYVTEDPGAVDAAAKHGALSIRFGLGWAKSHSFHTGQT---PVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGVPKKFVIDPHNLFRAA |
| 2FZW Chain:A ((4-371)) | VIKCKAAVAWEAGKPLSIEEIEVAPPK-A------HEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADI--SVAKIDPLAP----LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMT-DGGVDYSFECIGNVK---------------VMRAALEACHKGWGVSVVVGVAASGEEI-----------ATRP-FQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK-VDEFVTHNLSFDEINKAFELMHSGKSIRTVV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212314 for 3121 contacts (-68.0/contact) +
2D Compatibility (PS) -37037 + (NN) -8884 + (LL) 2208
1D Compatibility (HY) -13600 + (ID) 3800
Total energy: -273427.0 ( -87.61 by residue)
QMean score : 0.579
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