Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVRNQEKA-------ACLKLCG--NLGQISIFKGDFFDEKLILESVE--ECNVVINLVGILYEV----KEHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGIENS--------------KLSEYAQSKLKGEKAVTAA-----FPEAIIIKPSLVFGKEDNF---------FTKF----ARLAT-ILPFLPL------IGSGTTKFQPICVTDLAEMVYRIINLN--KQDKKIYNIGGPKIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEK-STDFEAIKIRPL-SIENVVPEYLKVYKKY |
| 1EK6 Chain:A ((1-338)) | MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA------------R--------------RE--------GDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195276 for 2327 contacts (-83.9/contact) +
2D Compatibility (PS) -30496 + (NN) -11075 + (LL) 3520
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -244377.0 ( -105.02 by residue)
QMean score : 0.461
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