Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPIFAVGDVHGEITLLDELLE--NWDKERERLLFVGDLIDRGENPAAVLRRVKALADQTGAI--------------------------VLKGNHEQMLLDFLEN-----PSGKMHYYLSQGGM-----ETIQSLIADSLDKKMTPEGLAKRVKEEASEL----------IDFIRKLPLYYEEGKYVFVHAGVDLTKKDWHDTEERDFF-WIREPFLFGQNKTGKVFIFGHTPVQNLHIDESSGIWVSEDKTRLDIDGGAVFGGELHGVVVEEKVITKSFSVKK |
| 2DFJ Chain:A ((2-268)) | --ATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIP---GPVAEEYSIAFGHWASLE-GKGTPEGIYA--------LDTGCCWGGSLTCLRWEDKQYFVQPS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69662 for 1642 contacts (-42.4/contact) +
2D Compatibility (PS) -23805 + (NN) -11709 + (LL) 1524
1D Compatibility (HY) -14400 + (ID) 2350
Total energy: -120402.0 ( -73.33 by residue)
QMean score : 0.359
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