Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNPTFGEKIDNVDYRSRFGVYAIIPNPTHDKIILVQAPN----GAWFLPGGEIEENENHLEALTRELIEELGYSATIGHYYGQADEYFYSRHRDTYYYNPAYIYEVTAYHKEQAPLEDFNHLAWFPIQEAKEKLKRGSHRWGVQAWEKNHHSRK
3EXQ Chain:A ((7-136))
--------------QPVELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDD----DRQHRKLGLLYRASNFTGTL-KASAEGQLSWLPITALTRENSAASLPEFLQVFTGTASTLV
General information:
TITO was launched using:
RESULT:
Template:
3EXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43372 for 879 contacts (-49.3/contact) +
2D Compatibility (PS) -13484 + (NN) -2897 + (LL) 744
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -62509.0 ( -71.11 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_3EXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXQ-query.scw
PDB file :
Tito_Scwrl_3EXQ.pdb
: