Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGLPAPRGFRAAFAAAYAVAYLAGGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGEGVGPAAAIYGSGSMFV---QEEPEHLRRRKLLTPPLHGAALDRYVPIIENSTRAAMHTWPVDRP---FAMLTVARSLMLDVIVKVIFGVDDPEEVRRLGRPFERLLN--LGVSEQLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGESGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGGGEAFTTAVINETLRVRPPAP-LTARVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVY-EHPHEFRPERFL-GTRPQTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPE---RIVRRSIMLVPRRGTRVRFRPAR |
| 1N97 Chain:A ((1-385)) | --------------MKRLSLREAWPY---LKDLQ-Q---DP--LAVLLAWGRA--HPRLFLPLP--RFPLALIFD---PEGVEGALL--AE-GTTKAT----------------FQYRALSRLT--GRGLLTDWG--ESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRG---EERDLDH-EMLALSLRLLGRALFGKPLS-------PSLAEHALKALDRIMAQTRSPLALL--DLAAEARFRKDRGALYREAEALIV--------------HPPLSH--------LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAES-----EEAALAAFQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFP-DGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF-RLDPL----PFPRVLAQ-VTLRPEGGLPARPRE-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1N97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -254893 for 3053 contacts (-83.5/contact) +
2D Compatibility (PS) -39008 + (NN) -5812 + (LL) 4676
1D Compatibility (HY) -4000 + (ID) 4500
Total energy: -303537.0 ( -99.42 by residue)
QMean score : 0.409
|
|
|