Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPL--NT-PVTGDDIYVLKSAESATKVPNFFVPKTMHNEGNYIISLGNLCRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPKEGYYTPGMELRAKYTLFAEGCRGHIGKQLIKKYNLDSEADAQHYGIGIKEIWDIDPSK--HKPGLVVHTAGWPLNDENTGGSFLYHLENNQVFVGLIIDLSYSNPH--LSPFDEFQRY-KHHPVVKQYLEGGKRVAYGARAICKGGLNSLPKMVFPGGALIGCDLGTLNFAKIKGSHTAMKSGMLAADAIAEALAAGREGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKFGAIGGGAFNFIDQNIFGGKIPVTLHDDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSVFLSNTNHEEDQPIHLKLADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM |
| 3I3L Chain:A ((20-387)) | ---HMTRSKVAIIGGGPAGSVAGLTLHKL------GHDVTIYERSAFPRY--RVGESLLPGTMSILN-RLGLQEKIDAQNYVKKPSATFLWGQDQAPWTF--SFAAPAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDR-VVLTVRR-----GG--------ESVTVESDFVIDAGGSGGPISRKLGVRQYD-----EFYRNFAVWSYFKLKDPFEGDLKGTTYSI----T--FEDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVD-EVRIVQDWSYD-TEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYRE-AYEQYHQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159844 for 2924 contacts (-54.7/contact) +
2D Compatibility (PS) -36064 + (NN) -7381 + (LL) 7984
1D Compatibility (HY) -800 + (ID) 2600
Total energy: -198705.0 ( -67.96 by residue)
QMean score : 0.451
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