Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEE----NYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFP-EVKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEKVFQSHHNMMVAHARAVKLFKDGGY-QGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQ-HILSVNGGKLNI-TDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGS-KYQLKGVGQREFDVDVPRTDWDWMIYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFETQERYPKKSAYWYKELAETKEIK |
| 1GNX Chain:A ((15-476)) | -ALTFPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDVALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAGGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGR-TDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDS-DADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDW------SFVRDGDLRLA---HQKLDFLGVNYYSPTLV----------------SAHSPWPGADRV-AFHQ-PPGETTAMGWAVDPSGLYELLRRLSSDFPA-LPLVITENGAAFHDY-ADPEGNVNDPERIAYVRDHLAAVHRAIKDGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTGTRIPKASARWYAEVARTGVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GNX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209927 for 3969 contacts (-52.9/contact) +
2D Compatibility (PS) -46377 + (NN) -13133 + (LL) 572
1D Compatibility (HY) -16800 + (ID) 7500
Total energy: -293165.0 ( -73.86 by residue)
QMean score : 0.711
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