Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILEVAFSIS-NDVHLVLHHQQERIKEAVSKRFKGVIFHAQIVEKYSGTGGAIMQENKTPIPTQHERVLILNADMPLITKDALTPLLESHNN---AIGLLHLADPKGYGRVILENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFL-EEECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYLEKGVSFKGECVLEQGVRLIGNCLI-ENARIKAYSVIEESQIINSSVGPFAHARPKSVICDSHVGNFVETKNAKLQGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
| 1FXJ Chain:A ((3-329)) | NNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQ----AEQLGTGHAMQQAAPFF--ADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGD--------------------------------DCEISPYTVVEDANLAAACTIGPF---------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -227936 for 2608 contacts (-87.4/contact) +
2D Compatibility (PS) -34927 + (NN) -9808 + (LL) 5388
1D Compatibility (HY) -21600 + (ID) 4950
Total energy: -293833.0 ( -112.67 by residue)
QMean score : 0.524
|
|
|