Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKAN--SGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQK--SGHIIATSSVAGLKAY--PGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKETEQGMTSLYKQYGITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW
1XG5 Chain:A ((28-277))
ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYE---CLKPEDVAEAVIYVLSTPAHIQIGDIQMRPT----
General information:
TITO was launched using:
RESULT:
Template:
1XG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138950 for 2046 contacts (-67.9/contact) +
2D Compatibility (PS) -26500 + (NN) -12477 + (LL) 384
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -191643.0 ( -93.67 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_1XG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG5-query.scw
PDB file :
Tito_Scwrl_1XG5.pdb
: