Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEMTLAFIEEQYKELDNLNNKE-NPAVLTRNTSTGELFVRKIIPSSF------APVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGKNLADLMKTN-APFDTDEVTRLMLMLSDALTELHANAIIHRDIKPSNIMISS--DGVLKLIDFDASRMFEVGKNQDTVNLGTIGYAAPEQYGYSQTDARSDIYSIGVLMLELLLGKNTLPDKEH----------------------ATSLEKIAMQAGAFDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIPWYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFVIFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS |
| 1TKI Chain:A ((20-274)) | --------LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM-TASEALQ--------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85685 for 1609 contacts (-53.3/contact) +
2D Compatibility (PS) -23972 + (NN) -12624 + (LL) 9604
1D Compatibility (HY) -9600 + (ID) 2200
Total energy: -124477.0 ( -77.36 by residue)
QMean score : 0.476
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