Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPT-QVKYWDEMAKAYEKENPDVTIEVSQMKE-SPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-DGK--LVADDKAGTELLTFMSELQKNKLLLAS----K-ATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDA-TENE-TFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
2Z8F Chain:A ((12-404)) | -------------------------------DGGVVNITYMHRLPDSEGMTLVNDIVAKWNKQHPDIQVKATKFDGKASDMIKKLETDVKSGEAPDLAQ-VGYAELPEVFTKGLLQDVTQYAE--QY-KNDFASGPYSLVQV-GGKAYGLPQDTGPLVYFYNKAEFEKLGITEIPQTADEFIAAAKTAAAAGK----YIMSYQPDEAG--NM---ISGLA-GASGGWYKVKGDSWVVNTETDGSKATADFYQQLLDAKAATTNPRWDPSFDASIKDGSLIGTVAAAWEAPLFMTSSGGT-GSGEWQVAQLGDWFGNA---GKTGPDGGSAVAVLKNSKH--PKEAMEFLDWFNTQV-PD---LVSQGLVPAATTEDAETPSEWSTFFGGQDIMKEFKTANNNMGDFTYMPGFSAVAAKMNE-TAAKATDGSGKVADIFSDAQTTSVDTLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34494 for 3420 contacts (-10.1/contact) +
2D Compatibility (PS) -40660 + (NN) -18183 + (LL) 4328
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -101159.0 ( -29.58 by residue)
QMean score : 0.427
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