Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKHYDYIAIGGGSGGIASINRAAMHGAKCALIEPKFLGGTCVNVGCVPKKVMWYGAQIKEAMDLYADAYGY-----QVDASFNFQKLVENREAYIERIRGSYKNGLDNNN-VDWIKGYAEFVDEK-TLRVNGELVTADHILIATGGEPALPSIPGAEFGITSDGFFALKELPK---------KVAVVGAGYIAVELAGVLQQ-LGSETHLFVRKHAPLRNFDPLLTDTLTEIIEQSDMTLHKHAIPQKVEKNPDGSLTLSLEDG--RTETVDTLIWAIGRKPVIKGLQIEKSGVELLESGHIAVDKFQNTNVAGIYAVGDVTGHY-ELTPVAIAAGRRLSERL--FNNKKDAHLNYENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDH----REPCRMKLICEGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK---- |
| 1GER Chain:A ((3-450)) | --KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGP--DYGFDTTI--NKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIK-GFARFV-DAKTLEVNGETITADHILIATGGRPSHPD---IP-GV--EYGID---SDGFFALPALPERVAVVGAGYIAVELAGVINGL-GAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELED-GRSET-VDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGA-VELTPVAVAAGRRLSERLFN--NKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTA---MYTAVTTHR-QPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNT--VAIHPT--AAEEFVTMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238609 for 3491 contacts (-68.3/contact) +
2D Compatibility (PS) -44568 + (NN) -3130 + (LL) 2240
1D Compatibility (HY) -42400 + (ID) 13250
Total energy: -339717.0 ( -97.31 by residue)
QMean score : 0.546
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