Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVA-QDPIPSSTLKACQDADAILLGAIGGPKWDNAPKR---PEDGLLALRKALGLFANIRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHWDESAAVDSL---------TYTRAEIERIIEKAFEIAATRNKKVTSVDKANVLASSKLWRKIAEEVASRH--PDITLEHLYIDAAAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGSAPDIANQNIANPMSMISSVSMMLRQSFSLFKEADAIDAAATRTMQAGFLTADL----GGNTTTTDFTNEVLKQIEGGE |
| 2AYQ Chain:A ((1-356)) | MKMKLAVLPGDGIGPEVMDAAIRVLKTVLDNDGHEAVFENALIGGAAIDEAG-TPLPEETLDICRRSDAILLGAVGGPKWDHNPASLRPE-KGLLGLRKEMGLFANLRPVKAYATLLNASPLKRERVENVDLVIVRELTGGLYFGRPSERR-GP-----GENEVVDTLAYTREEIERIIEKAFQLAQIRRKKLASVDKANVLESSRMWREIAEETAK-KYP-DVELSHMLVDSTSMQLIANPGQFDVIVTENMFGDILSDEASVITGSLGMLPSASLRSDRFGMYEPVHGSAPDIAGQGKANPLGTVLSAALMLRYSFGLEKEAAAIEKAVDDVLQDGYCTGDLQVANGKVVSTIELTDRLIEKLN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171931 for 2958 contacts (-58.1/contact) +
2D Compatibility (PS) -36733 + (NN) -16033 + (LL) 456
1D Compatibility (HY) -32800 + (ID) 9150
Total energy: -266191.0 ( -89.99 by residue)
QMean score : 0.577
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