Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
1ZAK Chain:A ((6-211))
LKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETL----EIRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPEN----EEIASRLTQRFDDTEEKVKLRLETYYQNIESLLSTYEN--IIVKVQGDATVDAVFAKIDELLGSI--
General information:
TITO was launched using:
RESULT:
Template:
1ZAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58288 for 1514 contacts (-38.5/contact) +
2D Compatibility (PS) -22854 + (NN) -16605 + (LL) 444
1D Compatibility (HY) -17200 + (ID) 4150
Total energy: -118653.0 ( -78.37 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1ZAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZAK-query.scw
PDB file :
Tito_Scwrl_1ZAK.pdb
: