Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKGIIRFLLVSFVLFFALSTGITGVQAAPASSKTSADLEKAEVFGDIDMTTSKKTTVIVELKEKSLAEAKEAGESQSKSKLKTARTKAKNKAIKAVKNGKVNREYEQVFSGFSMKLPANEIPKLLAVKDVKAVYPNVTYKTDNMKDKDVTISEDAVSPQMDDSAPYIGANDAWD-LGYTGKGIKVAIIDTGVEYNHPDLKK------NFGQYKGYDFVDNDYDPKETPTGDPRGEATDHGTHVAGTVAANGT-IKGVAPDATLLAYRVLGPGGS--GTTENVIAGVERAVQDGADVMNLSLGNSLNNPD-WATSTALDWAMSEGVVAVTSNGNSGPNGWTVGSPGTSREAISVGATQLPLNEYAVTFGSYSSAKVMGYNKEDDVKALNNKEVELVEAGIGEAKDFEGKDLTGKVAVVKRGSIAFVDKADNAKKAGAIGMVVYNNLSGEIEANVPGMSVPTIKLSLEDGEKLVSALKAGETKTTFKLTVSKALGEQVADFSSRGPVMDTWMIKPDISAPGVNIVSTIPTHD------PDHPYGYGSKQGTSMASPHIAGAVAVIKQAKP-----KWSVEQIKAAIMNTAVTLKDSDGEVYPHNAQGAGSARIMNAIKADSLVSPGSYSYGTFLKENGNETKNETFTIENQSSIRKSYTLEYSFNGSGISTSGTSRVVIPAHQTGKATAKVKVNTKKTKAGTYEGTVIVREGGKTVAKVPTLLIVKEPDYPRVTSVSVSEGSVQGTYQIETYLPAGAEELAFLVYDSNLDFAGQAGIYKNQDKGYQYFDWDGTINGGTKLPAGEYYLLAYAANKGKSSQVLTEEPFTVE
1WMD Chain:A ((5-319))--------------------------------------------------------------------------------------------------------------------------------------------------------------------RGIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKIT--ALYALGRTN-N---------ANDTNGHGTHVAGSVLGNGSTNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFG---------------------------------------S------------------------------------------------------------------------------------YADNINHVAQFSSRGPTK-DGRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLG----YPNGNQGWGRVTLDKSLNVA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1WMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2009 89825 44.71 306.57
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 44.71
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_1WMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WMD-query.scw
PDB file : Tito_Scwrl_1WMD.pdb: