Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTTASAPSEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSRQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVDEGFDVRGGALAPGTVRQWLAEHAGDGRRAGLTVVGTHLPHGGDATAMAVAAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLAGRGWTLEGVTSDTALAAYLVRPGQRSFTLDDLSLRYLRRELRAETPQQQQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARIDSTALLGEMELPVQRVLAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKT--GYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVDGLLQAVAA-----DGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGD-GYAELMTADYSQIEMRIMAHLSGDE-GLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLAS--RMLLQVHDELLFEI-APGERERVEALVRDKMGGAYP-LDVPLEVSVGYGRSWDAAAH |
| 3KTQ Chain:A ((1-539)) | -------------ALEEAP--------------------WPPP----EGAFVGFVLSRKEPMWA-DLLALAAARG-G-RVHRAP------------EPYKALRDLK--------EARGLLAK-DLSVLALRE-------GLGLP---PGDDPMLLAYLLDPS--NTTPEGVARRY-------G--GEWTE-----------------------------------------EAGERAALSERLFANLWGRLEG-------------------------EERLLWLYREVERPLSA--VLAHMEATG-----------------------------------VRL-----------------------------------DVAYLRALSLEVA-EEIARLEAEVFRLAG-------------------------------------------------------------------H---------------------------------------------------------------------------PFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALR--EAHPIVEKILQYRELTKLKSTYID---PLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAE-E-GWLLVALDYSQIELRVLAHLSGD-ENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEM----GARMLLQVHDELVLEAP-KERAEAVARLAKEVMEGVY-PLAVPLEVEVGIGEDWLSAK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209738 for 4450 contacts (-47.1/contact) +
2D Compatibility (PS) -56686 + (NN) -21064 + (LL) 21328
1D Compatibility (HY) -29200 + (ID) 9600
Total energy: -304960.0 ( -68.53 by residue)
QMean score : 0.462
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