Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSV-DFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2O66 Chain:A ((13-124))
FYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFG---------------EDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERGEKA-
General information:
TITO was launched using:
RESULT:
Template:
2O66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66070 for 615 contacts (-107.4/contact) +
2D Compatibility (PS) -10661 + (NN) -2533 + (LL) 1012
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -92052.0 ( -149.68 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_2O66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O66-query.scw
PDB file :
Tito_Scwrl_2O66.pdb
: