Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPVEALFQPFRLG-ALELPTRVVMAPMTRNFSP-GGVPNAKVVEYYRRRAAAGVGLIVSEGTTVGHKAANGYPNVPRFYGEDALAGWKQVVDAVHAEGGRIVPQLWHVGSVRRLGVEPDASVPGYGPMEKAKD--GKVLVHGMSKADIQEVIAAFAQAARDAQAIGMDGVEIHGAHGYLIDQFFWEGSNQRDDEYGG-SLANRSRFAVELVRAVRAAVG----ADFPIIFRFSQWKQQDYSARLVETPEGLREFLAPLVEA-GVDIFHCSTRRFWIP--EFEGS-E-L--NLAGWTRELT--GKPTITVGNVGLDGSEFLQFFGKTDEVAQPASIDGLVERLDKGEFDLVAVGRALLVDPEWAVKVREGRIGDIKPFSREALASLV |
| 3L5A Chain:A ((21-369)) | -MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYG-KLFEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILN-FGKV-YGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGY--TIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSP------------ESAL--------DALQ-H-ADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184439 for 2887 contacts (-63.9/contact) +
2D Compatibility (PS) -36887 + (NN) -19697 + (LL) 1476
1D Compatibility (HY) -18800 + (ID) 3900
Total energy: -262247.0 ( -90.84 by residue)
QMean score : 0.554
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