Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPHCETLLLEP-IEGVLRITLNRPQSRNAMSLAMVGELRAVLAAVRDDRSVRALVLRGAD-GHFCAGGDIKDMAGARAAGAEAYRTLNRAFGSLLEEAQAAPQLLVALVEGAVLGGGFGLACVSDVAIAAADAQFGLPETSLGILP-AQIAPFVVRRIGLTQARRLALTAARFDGREALRLGLVHFCEADADALEQRLEETLEQLRRCAPNANAATKALLLASESGELGALLDDAARQFAEAVGGAEGSEGTLAFVQKRKPVWAQ |
| 3KQF Chain:A ((7-264)) | -----LQNISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEE---QVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPV-HLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131513 for 2073 contacts (-63.4/contact) +
2D Compatibility (PS) -27770 + (NN) -11076 + (LL) 480
1D Compatibility (HY) -14000 + (ID) 3850
Total energy: -187729.0 ( -90.56 by residue)
QMean score : 0.470
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