Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKARFK--KRLLGSRGAFDL-NIDLEIKEAEVVALLGESGAGKSTILRILAGLEAVSSGYIEANHSVWLDTQKKIFLKPQQRKIGFVFQDYALFPHLNVYQNIAFA-------HPKDKNKIHEVLRLMRLENLSQQKIPKLSGGQAQRVALARALIAAKNLLLLDEPLNALDNALKNEVQQGLLDFIKRENLSVLLVSHDPNEITKLARTFLFLNNGVIDP-NQENRLFSN--RLLVKPLFEDENYCHYEVIPQ-----TISLPKDCLNPTFKLDFIQNKKF-----------------------------------------------------------------------
1OXS Chain:C ((1-352))MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFD-DRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAII-GIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK


General information:
TITO was launched using:
RESULT:

Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147597 for 2048 contacts (-72.1/contact) +
2D Compatibility (PS) -27377 + (NN) -3373 + (LL) -32
1D Compatibility (HY) -24400 + (ID) 4100
Total energy: -206879.0 ( -101.02 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_1OXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXS-query.scw
PDB file : Tito_Scwrl_1OXS.pdb: