Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVVVAAKRSAVGSFLGSLKNVGARQMGVSVLKDALNASSLKPSDVDSVILGNVLGAGLGQNIARQIQLDAGIPNDRNAFSVNMVCGSSMKAIQLAHDSIVLGCDEVVVCGGVENMSAAPYLSFDMREGKRMGNANMIDSMIHDGLWDAFNDYHMGITADNVAQAYHISREDQDAFALQSQLKARAAINAGKFQEEITPIEIANKKGVVVFKEDEYPR-DTTLESLAKLKPAFK--KDGSVTAGNSSGINDGASIIILCSAKKAQKLGLKTMATIKGFGLGGCSPDIMGICPSIAIKNNLKNIKMNLNDINLFELNEAFAAQSIAVLKELELNPNIVNVNGGAIAIGHPIGASGARILVTLLHEMKRSGHGVGCASLCVGGGQGLSVVVEQK |
| 1WL4 Chain:A ((6-397)) | -DPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYL-RTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRGVAALCIGGGMGIAMCVQRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221744 for 3849 contacts (-57.6/contact) +
2D Compatibility (PS) -42064 + (NN) -16527 + (LL) 416
1D Compatibility (HY) -35600 + (ID) 9300
Total energy: -324819.0 ( -84.39 by residue)
QMean score : 0.455
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