Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRLTGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPDEFGEPYREALTKLQKDAPPLPASKVHRVLDGQLGTKWRERFSSFN-DTPVASASIGQVHKAIWS-DGREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVASAPKVVIQEWIEGVPMAEIIRHGTT---EQRDLIGTLLAELTFDAPRRLGLMHGDAHPGNFMLLPDGRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVSVREIDEMLRQYVEPIQVEVFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAIPMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
| 4FR4 Chain:A ((14-177)) | ------------------------------------------------------------------------------------------------------------------------------FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE-RNEVRNVFKELQIMQ-------------------------GLEHPFLVNLWYSFQDEEDMF-----------MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA-LDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64322 for 1044 contacts (-61.6/contact) +
2D Compatibility (PS) -16449 + (NN) -5199 + (LL) 23112
1D Compatibility (HY) -9600 + (ID) 1350
Total energy: -73808.0 ( -70.70 by residue)
QMean score : 0.255
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