Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP--YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP
3NIZ Chain:A ((20-309))MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIR------GIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR---HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVF-EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP-


General information:
TITO was launched using:
RESULT:

Template: 3NIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151756 for 2188 contacts (-69.4/contact) +
2D Compatibility (PS) -29401 + (NN) -12364 + (LL) 64
1D Compatibility (HY) -35200 + (ID) 8200
Total energy: -236857.0 ( -108.25 by residue)
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3NIZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NIZ-query.scw
PDB file : Tito_Scwrl_3NIZ.pdb: