Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPLLLKRRKKARALEAAALAH |
4FG7 Chain:A ((12-277)) | ------------------------------------------------------QAEDIRDIYDF-RDVLGTGAFSEVILAEDKRTQKLVAIKCIA---SMENEIAVLHKIK-HPNIVALDDIYESG----GHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--------TPGYVAPEVLAQK--SKAVDCWSIGVIAYILLCGYPPFYDEN----DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172068 for 1896 contacts (-90.8/contact) +
2D Compatibility (PS) -26481 + (NN) -13740 + (LL) 7504
1D Compatibility (HY) -24000 + (ID) 5050
Total energy: -233835.0 ( -123.33 by residue)
QMean score : 0.602
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