Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEYEQWKEILSAIDKETDLSKDNVIAKIKEKLKALDSSTYEEWKETNFDVNHLFAVKYGLLHLAVHNNLKNVVNALFGVEGIDVNAVDKDKHTSLHLAVEKGHIGIVNSLLEVKA----DVNVEDENGKTPLYTAVQFGCKGEIEVLIGKMMIGALIRAGANVNAED-KDKCTPLHFAARCGRKEIVQTLIEAGANVNAANEDKRTPSHIATQFCRKEIVKVLVEAGADVRAADKYGITPLHFADGAETVKTLIGAGANVNVVDKDKRTPLHWVKGAETAETLIEAGVNVNTIDKGKRNPLHMAARCSCEGVIKTLIGKRADLLSKNNDSKIPSNFNKSHYIIRRVKSLWSEERMKRLDQQSKVSFVVFGLTILFGTATATTLFVTETIAFGPYPIIGTVVIVAAAAWVVSCAADKILEPSTKIDEMKAVQVDENMQKAPLNLST |
1K1A Chain:A ((156-345)) | ------------------------------------------------ELDIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLL---------LERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85094 for 1589 contacts (-53.6/contact) +
2D Compatibility (PS) -19580 + (NN) -4523 + (LL) 18852
1D Compatibility (HY) -6800 + (ID) 2850
Total energy: -99995.0 ( -62.93 by residue)
QMean score : 0.522
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