Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFLIVANWKMNGTRSLFVNFIGKLNDKSNE---ITSKLVICPPFTSLPGNIELN----SNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPI-----HGEYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTS---------KKHVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY |
| 3TA6 Chain:A ((3-256)) | RKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145042 for 1987 contacts (-73.0/contact) +
2D Compatibility (PS) -25091 + (NN) -7765 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -195740.0 ( -98.51 by residue)
QMean score : 0.522
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