Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRL-----NSIIIEAADK----------A-RVPAGGALAVDRHDFSGYITETLKNHENITVINEE-I---------------------NAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL |
| 3I3L Chain:A ((22-204)) | TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY------RVGESLLPGTMSILN---RLGLQ-EKIDAQNYVKKPSATFLWGQDQAPWTFSFAAPAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42418 for 882 contacts (-48.1/contact) +
2D Compatibility (PS) -13628 + (NN) -332 + (LL) 20496
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -43632.0 ( -49.47 by residue)
QMean score : 0.369
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