Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDT-FGEPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFANIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAA-SRRGKLTSVDKENVL-ASSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQT-TADLGGKLN---TTDIFEILSQKLNH------------------------------------------------------------------------------------------------------------------------------------------- |
| 2D1C Chain:A ((2-496)) | PLITTETGKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAA----KAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPV----GYGEKSANVTLRKLFETYANVRPVREFPNVPT-----PYAGRGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE-VAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRY-LEEFATADLIENALLYTLEEGRVLTGDVVGYDRGAKTTEYTEAIIQNLGKTPRKTQVRGYKPFRLPQVDGAIAPIVPRSRRVVGVDVFVETNLLPEALGKALEDLAAGTPFRLKMISNRGTQVYPPTGGLTDLVDHYRCRFLYTGEGEAKDPEILDLVSRVASRFRWMHLEKLQEFDGEPGFTKAQGED |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155723 for 2949 contacts (-52.8/contact) +
2D Compatibility (PS) -36190 + (NN) -17572 + (LL) 88
1D Compatibility (HY) -18400 + (ID) 5400
Total energy: -233197.0 ( -79.08 by residue)
QMean score : 0.497
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