Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFDYEDVQLIPNKCIVNSRSECDTTVILGK-HAFKMPIVPANMQTIINESIAEFLAENGYFYIMHRFNG-SA-------RI-----------------------PFVKKMK-----------------------------------------E------------------------------R---------------------------QLISSISVGVKKEECLFVEELAKQGLTPDYITIDIAHGHSNSVIEMIQRIKTRLPETFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA---RKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESSGETKIENGIAYKEYFGSASE--FQKGEKKNIEGKKIWIQHKGSLKNTLIEMHQDLQSSISYAGGRDLEAIRKV-DYVIVKNSIFNGDTI |
| 1ZFJ Chain:A ((10-477)) | -KGYTFDDVLLIPAESHVL-PNEVDLKTKLADNLTLNIPIITAAMDTVTGSKMAIAIARAGGLGVIHKNMSITEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAG--ADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVP--QVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKK-NKLVPEGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQFVEMSGAGLIESHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171865 for 2775 contacts (-61.9/contact) +
2D Compatibility (PS) -34931 + (NN) -11989 + (LL) 220
1D Compatibility (HY) -15600 + (ID) 5400
Total energy: -239565.0 ( -86.33 by residue)
QMean score : 0.518
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