Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
3C2T Chain:A ((2-125))
SSLLVKKLVESATTPMRGSEGAAGYDISSVEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDV--LAGVIDEDYTGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLD-------------------
General information:
TITO was launched using:
RESULT:
Template:
3C2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82280 for 870 contacts (-94.6/contact) +
2D Compatibility (PS) -13269 + (NN) -3004 + (LL) 64
1D Compatibility (HY) -6800 + (ID) 1950
Total energy: -107239.0 ( -123.26 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_3C2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C2T-query.scw
PDB file :
Tito_Scwrl_3C2T.pdb
: