Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDK-NAVSGEQMVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLLEKEDIEPPKLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDPVAML-PNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK |
1HYQ Chain:A ((2-233)) | -VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLP-VTLQNVLAGEARIDEAIYV--GPGG-VKVVPAGVSLEGLRKANPEKLEDVLTQIMESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTLGIE----MAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155189 for 2049 contacts (-75.7/contact) +
2D Compatibility (PS) -24872 + (NN) -5455 + (LL) 2264
1D Compatibility (HY) -12400 + (ID) 3850
Total energy: -199502.0 ( -97.37 by residue)
QMean score : 0.483
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