Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVPIYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIE-----PEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE
1BL8 Chain:A ((1-97))
---------------------------------------------------------------------------------------------------------ALHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSFGLVTAALATWFVGREQ--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93064 for 649 contacts (-143.4/contact) +
2D Compatibility (PS) -9376 + (NN) -1032 + (LL) 14112
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -101260.0 ( -156.02 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_1BL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BL8-query.scw
PDB file :
Tito_Scwrl_1BL8.pdb
: