Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFIGLAKQGYYDGIIFHRIIPDFMIQGGDPTGTGMGGESIYGESFEDEFSEELYNVRGALSMANA-GPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDR--------RHSVFGQLVNQSSFEVLDEIAAVETGSQ--DKPLEDVVILTIEVKE |
| 3S6M Chain:A ((3-167)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLKQ--KPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDN---------------------------EFLNHSSPTPQGWGYAVFGKVVE--GQDIVDKIKAVKTGS-HQDVPNDDVVIEKAVVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68662 for 1252 contacts (-54.8/contact) +
2D Compatibility (PS) -16323 + (NN) -6492 + (LL) 19880
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -83347.0 ( -66.57 by residue)
QMean score : 0.529
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