Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLFTHINSFVWGPPLLALLVGTGIYLSFRLGFIQLRQLSRAFKLIFREDNGQGDISSYAALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGM-ATKYAEGLLAI--KYRTKDTNGEISGGPMYYIVNGMGQKWKPLAVFFSAAGILVALLGIGTFTQVNAIASALEHTFKISTRFTSLILAVIVLFIIFGGIKSISKVSEKIVPFMAISYILATLIIIAVNYNKIPHTFQLIFSGAFSGTAAIGGFSGAIVKEAIQK--GIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLISMTGTFIDTIVICTLTGIAILVTGKWLEFDLQGAPLTQASFNTVFGSLGSFALTFCLVLFAFTTILGWSY-YGERCFEYLFGTKFINA-YRIIFVIMVGLGGFLQLDLIWVIADIVNGLMALPNLIALLVLSPIIVKETQKYFSETKNITKP |
| 4X2Z Chain:A ((9-309)) | QKTIYLTEDGVKY----------RSIVLKPGDSLGQFGQVYAKNKIVFTADD------------------VEDKEILYVPTT----------DKSILEYYGLDAQKYVIYLQTLAQKWNVQYRDN-------FLILE-----WRDGNCWISSAIVLLQAAKI---------------------RFKGFLTEAWAKLL-----------GGDPTDFVAWCYASCTAKVG--DFSDANWLLANLAEH-FDAD-----YTNAFLKKRVSCNCGIKSYELRGLEAC-IQPVRATNLLHFKTQYSNCPTCGANNTDEVIEASLPYLLLFATDGPATVDCDEDAVGTVVFV---GSTNS--------GHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYT-----------------------------------------------RFAFKNETS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249896 for 2240 contacts (-111.6/contact) +
2D Compatibility (PS) -31094 + (NN) -3029 + (LL) 11324
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -284795.0 ( -127.14 by residue)
QMean score : 0.170
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